On the performance of 1-level LDPC lattices

The low-density parity-check (LDPC) lattices perform very well in high dimensions under generalized min-sum iterative decoding algorithm. In this work we focus on 1-level LDPC lattices. We show that these lattices are the same as lattices constructed based on Construction A and low-density lattice-code (LDLC) lattices. In spite of having slightly lower coding gain, 1-level regular LDPC lattices have remarkable performances. The lower complexity nature of the decoding algorithm for these type of lattices allows us to run it for higher dimensions easily. Our simulation results show that a 1-level LDPC lattice of size 10000 can work as close as 1.1 dB at normalized error probability (NEP) of $10^{-5}$.This can also be reported as 0.6 dB at symbol error rate (SER) of $10^{-5}$ with sum-product algorithm.Comment: 1 figure, submitted to IWCIT 201

Early hospital mortality prediction using vital signals

Early hospital mortality prediction is critical as intensivists strive to make efficient medical decisions about the severely ill patients staying in intensive care units. As a result, various methods have been developed to address this problem based on clinical records. However, some of the laboratory test results are time-consuming and need to be processed. In this paper, we propose a novel method to predict mortality using features extracted from the heart signals of patients within the first hour of ICU admission. In order to predict the risk, quantitative features have been computed based on the heart rate signals of ICU patients. Each signal is described in terms of 12 statistical and signal-based features. The extracted features are fed into eight classifiers: decision tree, linear discriminant, logistic regression, support vector machine (SVM), random forest, boosted trees, Gaussian SVM, and K-nearest neighborhood (K-NN). To derive insight into the performance of the proposed method, several experiments have been conducted using the well-known clinical dataset named Medical Information Mart for Intensive Care III (MIMIC-III). The experimental results demonstrate the capability of the proposed method in terms of precision, recall, F1-score, and area under the receiver operating characteristic curve (AUC). The decision tree classifier satisfies both accuracy and interpretability better than the other classifiers, producing an F1-score and AUC equal to 0.91 and 0.93, respectively. It indicates that heart rate signals can be used for predicting mortality in patients in the ICU, achieving a comparable performance with existing predictions that rely on high dimensional features from clinical records which need to be processed and may contain missing information.Comment: 11 pages, 5 figures, preprint of accepted paper in IEEE&ACM CHASE 2018 and published in Smart Health journa

Predicting Subjective Sleep Quality Using Objective Measurements in Older Adults

Humans spend almost a third of their lives asleep. Sleep has a pivotal effect on job performance, memory, fatigue recovery, and both mental and physical health. Sleep quality (SQ) is a subjective experience and reported via patients’ self-reports. Predicting subjective SQ based on objective measurements can enhance diagnosis and treatment of SQ defects, especially in older adults who are subject to poor SQ. In this dissertation, we assessed enhancement of subjective SQ prediction using an easy-to-use E4 wearable device, machine learning techniques and identifying disease-specific risk factors of abnormal SQ in older adults. First, we designed a clinical decision support system to estimate SQ and feeling refreshed after sleep using data extracted from an E4 wearable device. Specifically, we processed four raw physiological signals of heart rate variability (HRV), electrodermal activity, body movement, and skin temperature using distinct signal processing methodologies. Following this, we extracted signal-specific features and selected a subset of the features using recursive feature elimination cross validation strategy to maximize the accuracy of SQ classifiers in predicting the SQ of older caregivers. Second, we investigated discovering more effective features in SQ prediction using HRV features which are not only effortlessly measurable but also can reflect sleep stage transitions and some sleep disorders. Evaluation of two interpretable machine learning methodologies and a convolutional neural network (CNN) methodology demonstrated the CNN outperforms by an accuracy of 0.6 in predicting light, medium, and deep SQ. This outcome verified the capability of using HRV features measurable by easy-to-use wearable devices, in predicting SQ. Finally, we scrutinized daytime sleepiness risk factors as a sign of abnormal SQ from four perspectives: sleep fragmented, sleep propensity, sleep resilience, and non-restorative sleep. The analysis demonstrates distinguishability of the main risk factors of excessive daytime sleepiness (EDS) between patients suffering from fragmented sleep (e.g. apnea) and sleep propensity. We identified the average area under oxygen desaturation curve corresponds to apnea/hypopnea event as a disease-specific risk factor of abnormal SQ. Our further daytime sleepiness prediction demonstrated the significant role of the founded disease-specific risk factor as well